Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav23A0A0G2JG17 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Gm18284-201ENSMUST00000172604 624 ntBASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Gm5874-201ENSMUST00000096101 508 ntBASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav23A0A0G2JG17 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav23A0A0G2JG17 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav23A0A0G2JG17 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav23A0A0G2JG17 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trav23A0A0G2JG17 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Gm27801-201ENSMUST00000184174 223 ntBASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Gm9988-201ENSMUST00000069786 435 ntBASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav23A0A0G2JG17 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms