Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13n-1A0A0G2JEU8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-1A0A0G2JEU8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 AV356131-201ENSMUST00000206201 750 ntBASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm10033-202ENSMUST00000211874 928 ntBASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav13n-1A0A0G2JEU8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm10849-201ENSMUST00000100397 618 ntBASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms