Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv15A0A0A6YYE3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv15A0A0A6YYE3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv15A0A0A6YYE3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv15A0A0A6YYE3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv15A0A0A6YYE3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv15A0A0A6YYE3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv15A0A0A6YYE3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv15A0A0A6YYE3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms