Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm5786-201ENSMUST00000085368 882 ntBASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv3A0A0A6YYE2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trbv3A0A0A6YYE2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv3A0A0A6YYE2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv3A0A0A6YYE2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv3A0A0A6YYE2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Trbv3A0A0A6YYE2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv3A0A0A6YYE2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms