Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbc1A0A0A6YWV4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm42778-201ENSMUST00000199644 553 ntBASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbc1A0A0A6YWV4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbc1A0A0A6YWV4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbc1A0A0A6YWV4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbc1A0A0A6YWV4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbc1A0A0A6YWV4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.33■□□□□ 0.36
Trbc1A0A0A6YWV4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.33■□□□□ 0.36
Trbc1A0A0A6YWV4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbc1A0A0A6YWV4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms