Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv23A0A0A6YWQ1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv23A0A0A6YWQ1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv23A0A0A6YWQ1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv23A0A0A6YWQ1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trbv23A0A0A6YWQ1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv23A0A0A6YWQ1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv23A0A0A6YWQ1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.25■□□□□ 0.19
Trbv23A0A0A6YWQ1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm12922-201ENSMUST00000120626 809 ntBASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms