Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms