Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav12d-3A0A075B6A4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav12d-3A0A075B6A4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav12d-3A0A075B6A4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav12d-3A0A075B6A4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Trav12d-3A0A075B6A4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 AA386476-201ENSMUST00000098781 1665 ntBASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms