Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Reep4-203ENSMUST00000226563 1444 ntBASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-1A0A075B644 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-1A0A075B644 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Gm10849-201ENSMUST00000100397 618 ntBASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-1A0A075B644 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Gm13234-201ENSMUST00000120010 747 ntBASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Gm29257-201ENSMUST00000186115 639 ntBASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-1A0A075B644 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13-1A0A075B644 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms