Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm26833-201ENSMUST00000180899 440 ntBASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm45417-201ENSMUST00000209533 758 ntBASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-7-dv9A0A075B639 BC021767-201ENSMUST00000126387 1716 ntBASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-7-dv9A0A075B639 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm7860-201ENSMUST00000121190 879 ntBASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6-7-dv9A0A075B639 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav6-7-dv9A0A075B639 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-7-dv9A0A075B639 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.77■□□□□ 0.27
Trav6-7-dv9A0A075B639 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav6-7-dv9A0A075B639 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-7-dv9A0A075B639 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms