Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8n-2A0A075B633 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8n-2A0A075B633 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8n-2A0A075B633 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav8n-2A0A075B633 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Gm18666-201ENSMUST00000190039 958 ntBASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav8n-2A0A075B633 Dio3-201ENSMUST00000097228 1449 ntBASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8n-2A0A075B633 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Gm44549-201ENSMUST00000208351 577 ntBASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8n-2A0A075B633 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8n-2A0A075B633 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms