Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-1A0A075B5Z7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Mir5133-201ENSMUST00000174955 77 ntBASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-1A0A075B5Z7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-1A0A075B5Z7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-1A0A075B5Z7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-1A0A075B5Z7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-1A0A075B5Z7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-1A0A075B5Z7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-1A0A075B5Z7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-1A0A075B5Z7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms