Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cldn9Q9Z0S7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn9Q9Z0S7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.28■□□□□ 0.52
Cldn9Q9Z0S7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cldn9Q9Z0S7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.27■□□□□ 0.51
Cldn9Q9Z0S7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn9Q9Z0S7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.26■□□□□ 0.51
Cldn9Q9Z0S7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.25■□□□□ 0.51
Cldn9Q9Z0S7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms