Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarcb1Q9Z0H3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcb1Q9Z0H3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.77■□□□□ 0.76
Smarcb1Q9Z0H3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarcb1Q9Z0H3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcb1Q9Z0H3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Smarcb1Q9Z0H3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcb1Q9Z0H3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms