Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn5Q9WVD4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Clcn5Q9WVD4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn5Q9WVD4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Gm37856-201ENSMUST00000191634 999 ntBASIC19.71■□□□□ 0.75
Clcn5Q9WVD4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn5Q9WVD4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn5Q9WVD4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn5Q9WVD4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clcn5Q9WVD4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcn5Q9WVD4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcn5Q9WVD4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Gm13146-201ENSMUST00000118508 780 ntBASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Gm13836-201ENSMUST00000121159 501 ntBASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn5Q9WVD4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn5Q9WVD4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn5Q9WVD4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn5Q9WVD4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.64■□□□□ 0.74
Clcn5Q9WVD4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn5Q9WVD4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clcn5Q9WVD4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Trmt13-210ENSMUST00000198454 880 ntBASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcn5Q9WVD4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms