Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ggps1Q9WTN0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ggps1Q9WTN0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ggps1Q9WTN0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Gm22240-201ENSMUST00000175225 82 ntBASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.17■□□□□ 0.98
Ggps1Q9WTN0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ggps1Q9WTN0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.15■□□□□ 0.98
Ggps1Q9WTN0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ggps1Q9WTN0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ggps1Q9WTN0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.15■□□□□ 0.98
Ggps1Q9WTN0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ggps1Q9WTN0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.14■□□□□ 0.97
Ggps1Q9WTN0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Gm8520-201ENSMUST00000186517 868 ntBASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ggps1Q9WTN0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Gm37856-201ENSMUST00000191634 999 ntBASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Rab3c-203ENSMUST00000224180 967 ntBASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ggps1Q9WTN0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ggps1Q9WTN0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ggps1Q9WTN0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ggps1Q9WTN0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ggps1Q9WTN0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ggps1Q9WTN0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ggps1Q9WTN0 Gm13168-201ENSMUST00000121771 632 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms