Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Rarb-207ENSMUST00000225921 2756 ntBASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nek3Q9R0A5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nek3Q9R0A5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nek3Q9R0A5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nek3Q9R0A5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Gm12922-201ENSMUST00000120626 809 ntBASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nek3Q9R0A5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nek3Q9R0A5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nek3Q9R0A5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nek3Q9R0A5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek3Q9R0A5 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek3Q9R0A5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms