Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Reep4-203ENSMUST00000226563 1444 ntBASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdzd4Q9QY39 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Gm27405-201ENSMUST00000184201 112 ntBASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzd4Q9QY39 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.45■□□□□ 0.87
Pdzd4Q9QY39 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 AV356131-201ENSMUST00000206201 750 ntBASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdzd4Q9QY39 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdzd4Q9QY39 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzd4Q9QY39 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzd4Q9QY39 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Gm13234-201ENSMUST00000120010 747 ntBASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzd4Q9QY39 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzd4Q9QY39 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdzd4Q9QY39 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdzd4Q9QY39 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms