Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep4Q9JM96 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep4Q9JM96 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Gm27801-201ENSMUST00000184174 223 ntBASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Gm4968-201ENSMUST00000071458 858 ntBASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep4Q9JM96 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Cdc42ep4Q9JM96 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdc42ep4Q9JM96 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdc42ep4Q9JM96 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep4Q9JM96 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.89■□□□□ 0.93
Cdc42ep4Q9JM96 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Cdc42ep4Q9JM96 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep4Q9JM96 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Gm22240-201ENSMUST00000175225 82 ntBASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep4Q9JM96 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep4Q9JM96 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Cdc42ep4Q9JM96 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cdc42ep4Q9JM96 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Gm20760-201ENSMUST00000179197 648 ntBASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Gm10252-201ENSMUST00000209541 832 ntBASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep4Q9JM96 AA386476-201ENSMUST00000098781 1665 ntBASIC20.83■□□□□ 0.93
Cdc42ep4Q9JM96 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cdc42ep4Q9JM96 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep4Q9JM96 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep4Q9JM96 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.83■□□□□ 0.92
Cdc42ep4Q9JM96 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cdc42ep4Q9JM96 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdc42ep4Q9JM96 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Gm12527-201ENSMUST00000117967 564 ntBASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cdc42ep4Q9JM96 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms