Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sec61a2Q9JLR1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a2Q9JLR1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a2Q9JLR1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a2Q9JLR1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a2Q9JLR1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a2Q9JLR1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a2Q9JLR1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a2Q9JLR1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sec61a2Q9JLR1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a2Q9JLR1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.03■□□□□ 0.32
Sec61a2Q9JLR1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms