Protein–RNA interactions for Protein: Q9JK54

Msgn1, Mesogenin-1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msgn1Q9JK54 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
Msgn1Q9JK54 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msgn1Q9JK54 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msgn1Q9JK54 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msgn1Q9JK54 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Msgn1Q9JK54 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Gm11249-201ENSMUST00000117071 859 ntBASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msgn1Q9JK54 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msgn1Q9JK54 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.83■□□□□ 0.92
Msgn1Q9JK54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msgn1Q9JK54 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Gm6576-201ENSMUST00000169678 883 ntBASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Msgn1Q9JK54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Gm22325-201ENSMUST00000158904 308 ntBASIC20.8■□□□□ 0.92
Msgn1Q9JK54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Msgn1Q9JK54 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Msgn1Q9JK54 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Gm10698-201ENSMUST00000182663 604 ntBASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Msgn1Q9JK54 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Gm7977-201ENSMUST00000193787 748 ntBASIC20.77■□□□□ 0.92
Msgn1Q9JK54 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.77■□□□□ 0.92
Msgn1Q9JK54 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Msgn1Q9JK54 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msgn1Q9JK54 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms