Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rhox4bQ9JI43 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rhox4bQ9JI43 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rhox4bQ9JI43 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rhox4bQ9JI43 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rhox4bQ9JI43 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rhox4bQ9JI43 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms