Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Atp13a1Q9EPE9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Gm15710-201ENSMUST00000121821 636 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Gm5075-201ENSMUST00000196916 622 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a1Q9EPE9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a1Q9EPE9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a1Q9EPE9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp13a1Q9EPE9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp13a1Q9EPE9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp13a1Q9EPE9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a1Q9EPE9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a1Q9EPE9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atp13a1Q9EPE9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a1Q9EPE9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a1Q9EPE9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms