Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.64■□□□□ 0.41
Cdc40Q9DC48 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 AV356131-201ENSMUST00000206201 750 ntBASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdc40Q9DC48 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdc40Q9DC48 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Gm10033-202ENSMUST00000211874 928 ntBASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdc40Q9DC48 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Gm37179-201ENSMUST00000194862 823 ntBASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdc40Q9DC48 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc40Q9DC48 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.58■□□□□ 0.41
Cdc40Q9DC48 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.58■□□□□ 0.41
Cdc40Q9DC48 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.58■□□□□ 0.41
Cdc40Q9DC48 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cdc40Q9DC48 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cdc40Q9DC48 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Cdc40Q9DC48 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms