Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rita1Q9D1H0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rita1Q9D1H0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Nespas-201ENSMUST00000143738 1083 ntBASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rita1Q9D1H0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rita1Q9D1H0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.56■□□□□ 0.4
Rita1Q9D1H0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rita1Q9D1H0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Notumos-201ENSMUST00000151998 2659 ntBASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rita1Q9D1H0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rita1Q9D1H0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Rita1Q9D1H0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rita1Q9D1H0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms