Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssbp3Q9D032 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.81■□□□□ 0.12
Ssbp3Q9D032 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssbp3Q9D032 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssbp3Q9D032 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Gm38205-201ENSMUST00000192243 258 ntBASIC15.78■□□□□ 0.12
Ssbp3Q9D032 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssbp3Q9D032 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Gm37179-201ENSMUST00000194862 823 ntBASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Gm7514-201ENSMUST00000209475 934 ntBASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssbp3Q9D032 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssbp3Q9D032 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.77■□□□□ 0.11
Ssbp3Q9D032 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssbp3Q9D032 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssbp3Q9D032 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssbp3Q9D032 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssbp3Q9D032 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms