Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrps28Q9CY16 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.17■□□□□ 0.34
Mrps28Q9CY16 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrps28Q9CY16 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrps28Q9CY16 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrps28Q9CY16 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mrps28Q9CY16 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Golph3-202ENSMUST00000226517 2359 ntBASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrps28Q9CY16 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.14■□□□□ 0.33
Mrps28Q9CY16 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrps28Q9CY16 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mrps28Q9CY16 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrps28Q9CY16 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mrps28Q9CY16 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms