Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.25■□□□□ 0.51
Msantd3Q9CR78 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msantd3Q9CR78 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Msantd3Q9CR78 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msantd3Q9CR78 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Gm7860-201ENSMUST00000121190 879 ntBASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msantd3Q9CR78 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Gm13168-201ENSMUST00000121771 632 ntBASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Gm26524-201ENSMUST00000192339 390 ntBASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msantd3Q9CR78 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Msantd3Q9CR78 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msantd3Q9CR78 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms