Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Gm6420-201ENSMUST00000193885 723 ntBASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm7Q9CQQ8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm7Q9CQQ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Nespas-201ENSMUST00000143738 1083 ntBASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm7Q9CQQ8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm7Q9CQQ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm7Q9CQQ8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm7Q9CQQ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.18■□□□□ 0.66
Lsm7Q9CQQ8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms