Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rpl39lQ9CQD0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpl39lQ9CQD0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpl39lQ9CQD0 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39lQ9CQD0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39lQ9CQD0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39lQ9CQD0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39lQ9CQD0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms