Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Rpa3Q9CQ71 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rpa3Q9CQ71 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpa3Q9CQ71 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpa3Q9CQ71 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.08■□□□□ 0.8
Rpa3Q9CQ71 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rpa3Q9CQ71 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rpa3Q9CQ71 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpa3Q9CQ71 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Rpa3Q9CQ71 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpa3Q9CQ71 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Gm7860-201ENSMUST00000121190 879 ntBASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Gm9988-201ENSMUST00000069786 435 ntBASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpa3Q9CQ71 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpa3Q9CQ71 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa3Q9CQ71 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa3Q9CQ71 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa3Q9CQ71 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpa3Q9CQ71 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rpa3Q9CQ71 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.02■□□□□ 0.8
Rpa3Q9CQ71 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpa3Q9CQ71 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Gm15039-201ENSMUST00000118914 875 ntBASIC20.01■□□□□ 0.79
Rpa3Q9CQ71 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms