Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Gm6139-201ENSMUST00000079261 882 ntBASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Trim11Q99PQ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim11Q99PQ2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Trim11Q99PQ2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim11Q99PQ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Gm27801-201ENSMUST00000184174 223 ntBASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Trim11Q99PQ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim11Q99PQ2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim11Q99PQ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim11Q99PQ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 BC021767-201ENSMUST00000126387 1716 ntBASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim11Q99PQ2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim11Q99PQ2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms