Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Rarb-207ENSMUST00000225921 2756 ntBASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cttnbp2nlQ99LJ0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.2■□□□□ 0.66
Cttnbp2nlQ99LJ0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cttnbp2nlQ99LJ0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cttnbp2nlQ99LJ0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.16■□□□□ 0.66
Cttnbp2nlQ99LJ0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cttnbp2nlQ99LJ0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cttnbp2nlQ99LJ0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cttnbp2nlQ99LJ0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cttnbp2nlQ99LJ0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cttnbp2nlQ99LJ0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms