Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Gm43530-201ENSMUST00000195920 274 ntBASIC19.13■□□□□ 0.65
Cdk9Q99J95 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.12■□□□□ 0.65
Cdk9Q99J95 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cdk9Q99J95 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdk9Q99J95 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.11■□□□□ 0.65
Cdk9Q99J95 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.1■□□□□ 0.65
Cdk9Q99J95 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.1■□□□□ 0.65
Cdk9Q99J95 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.1■□□□□ 0.65
Cdk9Q99J95 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.1■□□□□ 0.65
Cdk9Q99J95 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdk9Q99J95 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdk9Q99J95 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk9Q99J95 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.08■□□□□ 0.65
Cdk9Q99J95 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdk9Q99J95 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.08■□□□□ 0.64
Cdk9Q99J95 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.08■□□□□ 0.64
Cdk9Q99J95 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdk9Q99J95 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.07■□□□□ 0.64
Cdk9Q99J95 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdk9Q99J95 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms