Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha11Q91Y19 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha11Q91Y19 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha11Q91Y19 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha11Q91Y19 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha11Q91Y19 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Gm45640-201ENSMUST00000210665 1896 ntBASIC20■□□□□ 0.79
Pcdha11Q91Y19 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha11Q91Y19 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha11Q91Y19 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha11Q91Y19 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha11Q91Y19 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Pcdha11Q91Y19 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Gm13534-201ENSMUST00000121169 513 ntBASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha11Q91Y19 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha11Q91Y19 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha11Q91Y19 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha11Q91Y19 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdha11Q91Y19 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms