Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdha3Q91Y16 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha3Q91Y16 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha3Q91Y16 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha3Q91Y16 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha3Q91Y16 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha3Q91Y16 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha3Q91Y16 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha3Q91Y16 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha3Q91Y16 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha3Q91Y16 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdha3Q91Y16 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.83■□□□□ 0.77
Pcdha3Q91Y16 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.83■□□□□ 0.77
Pcdha3Q91Y16 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha3Q91Y16 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdha3Q91Y16 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdha3Q91Y16 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha3Q91Y16 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha3Q91Y16 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha3Q91Y16 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.83■□□□□ 0.76
Pcdha3Q91Y16 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha3Q91Y16 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Gm42778-201ENSMUST00000199644 553 ntBASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Gm9988-201ENSMUST00000069786 435 ntBASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha3Q91Y16 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms