Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm7860-201ENSMUST00000121190 879 ntBASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb1Q91Y08 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb1Q91Y08 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb1Q91Y08 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb1Q91Y08 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhb1Q91Y08 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb1Q91Y08 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb1Q91Y08 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb1Q91Y08 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb1Q91Y08 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 BC021767-201ENSMUST00000126387 1716 ntBASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms