Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga4Q91XY4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga4Q91XY4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga4Q91XY4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga4Q91XY4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 AA386476-201ENSMUST00000098781 1665 ntBASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga4Q91XY4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Gm42778-201ENSMUST00000199644 553 ntBASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga4Q91XY4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Gm42642-201ENSMUST00000200683 355 ntBASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhga4Q91XY4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Gm18671-201ENSMUST00000214826 683 ntBASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga4Q91XY4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga4Q91XY4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga4Q91XY4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms