Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb1Q91XX8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhgb1Q91XX8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb1Q91XX8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb1Q91XX8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Pcdhgb1Q91XX8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb1Q91XX8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb1Q91XX8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Gm6420-201ENSMUST00000193885 723 ntBASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhgb1Q91XX8 Nespas-201ENSMUST00000143738 1083 ntBASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb1Q91XX8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb1Q91XX8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb1Q91XX8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms