Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx1Q91V10 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vsx1Q91V10 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.83■□□□□ 0.6
Vsx1Q91V10 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.83■□□□□ 0.6
Vsx1Q91V10 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx1Q91V10 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.83■□□□□ 0.6
Vsx1Q91V10 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx1Q91V10 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx1Q91V10 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx1Q91V10 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.83■□□□□ 0.6
Vsx1Q91V10 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx1Q91V10 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Gm6576-201ENSMUST00000169678 883 ntBASIC18.82■□□□□ 0.6
Vsx1Q91V10 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.82■□□□□ 0.6
Vsx1Q91V10 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vsx1Q91V10 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Gm12896-201ENSMUST00000118430 226 ntBASIC18.81■□□□□ 0.6
Vsx1Q91V10 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vsx1Q91V10 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Vsx1Q91V10 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Gm5643-201ENSMUST00000117081 966 ntBASIC18.8■□□□□ 0.6
Vsx1Q91V10 Gm715-201ENSMUST00000117865 831 ntBASIC18.8■□□□□ 0.6
Vsx1Q91V10 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.8■□□□□ 0.6
Vsx1Q91V10 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.8■□□□□ 0.6
Vsx1Q91V10 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vsx1Q91V10 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.8■□□□□ 0.6
Vsx1Q91V10 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.79■□□□□ 0.6
Vsx1Q91V10 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.79■□□□□ 0.6
Vsx1Q91V10 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vsx1Q91V10 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms