Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb11Q91UZ8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb11Q91UZ8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb11Q91UZ8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb11Q91UZ8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb11Q91UZ8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Gm10493-201ENSMUST00000097270 612 ntBASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb11Q91UZ8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb11Q91UZ8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhb11Q91UZ8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb11Q91UZ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb11Q91UZ8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Reep4-203ENSMUST00000226563 1444 ntBASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb11Q91UZ8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Gm18284-201ENSMUST00000172604 624 ntBASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb11Q91UZ8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb11Q91UZ8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb11Q91UZ8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb11Q91UZ8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms