Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Gm5408-201ENSMUST00000197998 747 ntBASIC20.31■□□□□ 0.84
TraipQ8VIG6 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.31■□□□□ 0.84
TraipQ8VIG6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TraipQ8VIG6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.3■□□□□ 0.84
TraipQ8VIG6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.3■□□□□ 0.84
TraipQ8VIG6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TraipQ8VIG6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.29■□□□□ 0.84
TraipQ8VIG6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TraipQ8VIG6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.28■□□□□ 0.84
TraipQ8VIG6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Gm12527-201ENSMUST00000117967 564 ntBASIC20.28■□□□□ 0.84
TraipQ8VIG6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.28■□□□□ 0.84
TraipQ8VIG6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TraipQ8VIG6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.27■□□□□ 0.84
TraipQ8VIG6 Gm20760-201ENSMUST00000179197 648 ntBASIC20.27■□□□□ 0.84
TraipQ8VIG6 Rab3c-203ENSMUST00000224180 967 ntBASIC20.27■□□□□ 0.84
TraipQ8VIG6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.27■□□□□ 0.84
TraipQ8VIG6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.27■□□□□ 0.84
TraipQ8VIG6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TraipQ8VIG6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
TraipQ8VIG6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.26■□□□□ 0.83
TraipQ8VIG6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TraipQ8VIG6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Gm20049-201ENSMUST00000219950 730 ntBASIC20.25■□□□□ 0.83
TraipQ8VIG6 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.25■□□□□ 0.83
TraipQ8VIG6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TraipQ8VIG6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TraipQ8VIG6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms