Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Mir5122-201ENSMUST00000175004 89 ntBASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cspg4Q8VHY0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cspg4Q8VHY0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cspg4Q8VHY0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cspg4Q8VHY0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.44■□□□□ 0.22
Cspg4Q8VHY0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Gm5867-201ENSMUST00000063197 592 ntBASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg4Q8VHY0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.42■□□□□ 0.22
Cspg4Q8VHY0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg4Q8VHY0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms