Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dnajc28Q8VCE1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dnajc28Q8VCE1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dnajc28Q8VCE1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Gm12441-201ENSMUST00000121806 588 ntBASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dnajc28Q8VCE1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dnajc28Q8VCE1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Dnajc28Q8VCE1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dnajc28Q8VCE1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dnajc28Q8VCE1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dnajc28Q8VCE1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dnajc28Q8VCE1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dnajc28Q8VCE1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Gm6420-201ENSMUST00000193885 723 ntBASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Gm6365-201ENSMUST00000054711 744 ntBASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dnajc28Q8VCE1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnajc28Q8VCE1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dnajc28Q8VCE1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms