Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ndc1Q8VCB1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Gm38205-201ENSMUST00000192243 258 ntBASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Gm10602-201ENSMUST00000098239 609 ntBASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc1Q8VCB1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc1Q8VCB1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ndc1Q8VCB1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.9■□□□□ 0.46
Ndc1Q8VCB1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Ndc1Q8VCB1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.89■□□□□ 0.46
Ndc1Q8VCB1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
Ndc1Q8VCB1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Ndc1Q8VCB1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Gm12933-201ENSMUST00000120203 872 ntBASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndc1Q8VCB1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms