Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdt1Q8R4E9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdt1Q8R4E9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdt1Q8R4E9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdt1Q8R4E9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdt1Q8R4E9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cdt1Q8R4E9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdt1Q8R4E9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdt1Q8R4E9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdt1Q8R4E9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdt1Q8R4E9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cdt1Q8R4E9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdt1Q8R4E9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms