Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Zcchc9Q8R1J3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zcchc9Q8R1J3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zcchc9Q8R1J3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Gm5408-201ENSMUST00000197998 747 ntBASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zcchc9Q8R1J3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zcchc9Q8R1J3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zcchc9Q8R1J3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Zcchc9Q8R1J3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Zcchc9Q8R1J3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Zcchc9Q8R1J3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zcchc9Q8R1J3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms