Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnot6Q8K3P5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnot6Q8K3P5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnot6Q8K3P5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot6Q8K3P5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot6Q8K3P5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot6Q8K3P5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot6Q8K3P5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot6Q8K3P5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot6Q8K3P5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Cnot6Q8K3P5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot6Q8K3P5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot6Q8K3P5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot6Q8K3P5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot6Q8K3P5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot6Q8K3P5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms