Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shtn1Q8K2Q9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shtn1Q8K2Q9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Gm715-201ENSMUST00000117865 831 ntBASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.51■■□□□ 1.19
Shtn1Q8K2Q9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.5■■□□□ 1.19
Shtn1Q8K2Q9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Gm6576-201ENSMUST00000169678 883 ntBASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shtn1Q8K2Q9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shtn1Q8K2Q9 Gm15565-201ENSMUST00000118890 427 ntBASIC22.48■■□□□ 1.19
Shtn1Q8K2Q9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shtn1Q8K2Q9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shtn1Q8K2Q9 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Shtn1Q8K2Q9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Shtn1Q8K2Q9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Dio3-201ENSMUST00000097228 1449 ntBASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shtn1Q8K2Q9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Gm10698-201ENSMUST00000182663 604 ntBASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Gm2559-201ENSMUST00000201323 363 ntBASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Shtn1Q8K2Q9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shtn1Q8K2Q9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms