Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Colgalt1Q8K297 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.55■□□□□ 0.88
Colgalt1Q8K297 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.55■□□□□ 0.88
Colgalt1Q8K297 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.55■□□□□ 0.88
Colgalt1Q8K297 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Colgalt1Q8K297 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
Colgalt1Q8K297 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Colgalt1Q8K297 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Gm37856-201ENSMUST00000191634 999 ntBASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Colgalt1Q8K297 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Colgalt1Q8K297 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Colgalt1Q8K297 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Colgalt1Q8K297 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Colgalt1Q8K297 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Colgalt1Q8K297 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Gm7860-201ENSMUST00000121190 879 ntBASIC20.49■□□□□ 0.87
Colgalt1Q8K297 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Colgalt1Q8K297 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Gm26524-201ENSMUST00000192339 390 ntBASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Trmt13-210ENSMUST00000198454 880 ntBASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Colgalt1Q8K297 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.47■□□□□ 0.87
Colgalt1Q8K297 Gm10812-201ENSMUST00000099864 546 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms